Data Engineer, Radiology
Mass General Brigham4 days ago
Boston, MA, USAMid Level
Base Salary
$75k - $110k/yr
Responsibilities
- Harmonize cancer imaging datasets and encode research and AI-analysis results into standard DICOM representations for ingestion into IDC.
- Develop and maintain open-source Python and C++ tools for accessing IDC data and converting between DICOM and research formats.
- Build and run cloud-based analysis workflows using Google Cloud, Terra, and JetStream2 for large imaging cohorts.
- Develop agentic interfaces to IDC and apply agentic approaches to support the project and its users.
- Modernize the 3D Slicer architecture by implementing modules, reusable packages, and tests.
- Develop, optimize, validate, and quality-test advanced MR image reconstruction and motion-compensation software.
- Analyze hardware requirements, guide computer equipment selection and setup, and configure required software environments.
- Test and integrate components from collaborating institutions and report defects upstream.
- Prepare documentation, tutorials, example notebooks, webinar materials, technical analyses, diagrams, and grant or manuscript contributions.
- Support IDC users, participate in team meetings, track work in GitHub, and complete onboarding and workplace compliance duties.
Requirements
- Bachelor’s degree required; Computer Science is highly preferred.
- Master’s degree in a related science or engineering field is highly preferred.
- More than two years of experience in advanced MR imaging reconstruction software development is required.
- More than one year of medical-field and patient-care experience is preferred.
- Proficiency in Python, MATLAB, C++, PyTorch, GPU and CPU multithreaded programming, and Linux, Windows, and Mac operating systems.
- Knowledge of MR image reconstruction and analysis packages such as BART, XD-GRASP, SigPy, and FreeSurfer.
- Strong attention to detail and communication skills, particularly for documentation.
Benefits
- Onsite position at 75 Francis Street with a 40-hour scheduled work week and day shift.
- Regular employee position with comprehensive benefits, career advancement opportunities, applicable differentials, premiums, bonuses, and recognition programs.
About Mass General Brigham
Mass General Brigham is an integrated nonprofit academic health care system headquartered in Somerville, Massachusetts. It operates academic medical centers, community and specialty hospitals, physician networks, and a health plan, while conducting biomedical research and education as a principal teaching affiliate of Harvard Medical School. The system traces its roots to Partners HealthCare (formed in 1994) and includes Massachusetts General Hospital and Brigham and Women’s Hospital.