MIGx AG

Data Engineer - Knowledge Graphs & Semantic Technologies

MIGx AG
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2 months ago
Barcelona, SpainSenior

Responsibilities

  • Design, build, evolve, and deploy production knowledge graphs in Stardog.
  • Model ontologies, taxonomies, and vocabularies using RDF, RDFS, OWL, SKOS, and SHACL.
  • Write, optimize, and troubleshoot SPARQL queries, rules, and inference over large graphs.
  • Integrate relational, API, file, and semi-structured sources through virtual graphs and mappings such as R2RML.
  • Lead discovery sessions with subject matter experts and translate business questions into competency questions and semantic models.
  • Align models with life science standards and public ontologies, including identifier mapping and entity resolution.
  • Automate graph builds, tests, and deployments using Python and Git-based CI/CD workflows.
  • Embed data quality, validation, reconciliation, governance, lineage, and reusable semantic assets into the graph lifecycle.
  • Document models, enable colleagues, and contribute to agile team ceremonies and continuous improvement.

Requirements

  • Hands-on experience delivering production knowledge graph solutions with Stardog; experience with GraphDB, Amazon Neptune, Virtuoso, or Anzo may transfer.
  • Strong command of RDF, RDFS, OWL, SKOS, SHACL, and SPARQL.
  • Practical experience with ontology and taxonomy modeling, stakeholder discovery, and production semantic models.
  • Experience mapping and virtualizing relational and semi-structured sources into graphs.
  • Solid Python and SQL skills for data preparation, transformation, automation, and troubleshooting.
  • Familiarity with Git-based workflows and CI/CD, including GitHub Actions or Azure DevOps.
  • Experience with life science or healthcare data and its quality and regulatory expectations.
  • Ability to scope work independently, propose and defend approaches, and take ownership.
  • Working knowledge of data quality, validation frameworks, and test-driven data development.
  • Experience working in agile environments such as Scrum or Kanban.
  • Professional working proficiency in English.
  • Preferred: familiarity with SNOMED CT, MeSH, ChEBI, UMLS, LOINC, CDISC, SDTM, RIM, IDMP, GxP, FAIR data principles, GraphRAG, vector search, LLM-assisted ontology work, Neo4j, data lineage/catalog/governance tooling, Terraform, Bash, PowerShell, Docker, or Kubernetes.
  • Local language skills such as Spanish, Catalan, or Georgian are a plus.

Benefits

  • Hybrid work model with a flexible schedule.
  • 25 holiday days per year.
  • Free English classes.
  • Career development opportunities and the opportunity to help shape the company’s future.
  • Employee-centric culture informed by employee feedback.
  • Training programs supporting personal and professional development.
  • International company with a friendly atmosphere and supportive management team.

Tech Stack

BashDockerGitGitHub ActionsKubernetesNeo4jPowerShellPythonSQLTerraform

Categories

Data Engineering
MIGx AG

About MIGx AG

51-200 employees

MIGx AG is a Basel (BS)-headquartered, privately held IT services consultancy focused on life sciences. It builds and operates data platforms, cloud-native pipelines, and AI/advanced analytics for pharmaceutical, biotechnology, medical device, and diagnostics companies, with offerings spanning data strategy, governance, engineering, and compliant architectures. Revenue comes from consulting and end-to-end project delivery across regulated R&D, clinical, and commercial use cases.

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