9 hours ago
San Francisco, CA, USAMid Level / Senior
Base Salary
$180k - $240k/yr
Responsibilities
- Build and maintain cloud data platforms with object storage, lakehouse layouts, catalogs, lineage, dataset versioning, query layers, and access layers.
- Design and operate systems for clinical and molecular data, including harmonization, metadata, dataset releases, retention, governance, and data integration.
- Develop reproducible, containerized bioinformatics workflows for omics data using cloud batch compute.
- Build data quality checks, biological validation, and visualizations to identify and resolve data issues.
- Deliver training-ready datasets, versioned data releases, and interfaces for deploying data alongside models in partner environments.
- Operate reliable, secure, observable, and cost-effective production infrastructure, including Kubernetes clusters and distributed workload orchestration.
Requirements
- Two to five years of experience building data infrastructure and production pipelines in biotech, diagnostics, biobanking, health data, or related fields involving sensitive biological or clinical data.
- Production experience operating Kubernetes, building infrastructure as code with Terraform or similar tools, and designing deployment systems.
- Strong Python and/or Go skills, with experience owning infrastructure reliability, observability, security, and cost optimization.
- Experience with distributed job scheduling and orchestration, large-scale data pipelines, and infrastructure supporting machine learning workloads.
- Familiarity with a major cloud provider, preferably AWS; workflow tools such as Nextflow; lakehouse and warehouse design; data catalogs; and Docker.
- Experience with omics or bioinformatics workflows and biomedical data standards such as OMOP or FHIR is useful.
- R or SQL experience is a plus.
- Familiarity with HIPAA, GDPR, or SOC 2 compliance controls and associated audit evidence is beneficial.
- GPU cluster or distributed training experience is valuable.
Benefits
- Base salary of $180,000 to $240,000 annually.
- Hybrid role based in San Francisco, California, with candidates required to be based in or willing to relocate to the area.
- Visa sponsorship is not available.