1 day ago
San Francisco, CA, USAMid Level / Senior
Base Salary
$180k - $240k/yr
Responsibilities
- Build and maintain cloud data platform components including object storage, lakehouse architecture, catalogs, lineage, dataset versioning, and query and access layers.
- Design and operate governed data warehouses and systems for clinical records, molecular features, metadata, retention, and dataset releases.
- Develop reproducible, containerized bioinformatics workflows for omics data using cloud batch compute.
- Implement data quality checks, biological validation, and visualizations to identify issues across processing steps.
- Deliver versioned, training-ready datasets and data deployment interfaces for model use in partner environments.
- Operate production infrastructure covering Kubernetes, workload orchestration, security, reliability, observability, and cost optimization.
- Design and operate CI/CD and deployment systems and implement infrastructure as code.
Requirements
- Two to five years of experience building data infrastructure and production pipelines as a platform engineer in biotech, diagnostics, biobanking, health data, or a related field involving sensitive biological or clinical data.
- Production experience operating Kubernetes clusters, writing infrastructure as code with Terraform or similar tools, and shipping tested, documented Python and/or Go code.
- Experience designing CI/CD and deployment systems, orchestrating distributed workloads, and owning infrastructure reliability, observability, security, and cost.
- Familiarity with a major cloud provider, preferably AWS, Docker, workflow managers such as Nextflow, lakehouse and warehouse design, data catalogs, and orchestration.
- Experience with large-scale data pipelines, machine learning infrastructure, or GPU workloads is valuable.
- Knowledge of omics workflows, bioinformatics tools, OMOP, FHIR, R, or SQL is relevant.
- Experience implementing compliance controls and audit evidence for HIPAA, GDPR, or SOC 2 is beneficial.
Benefits
- Base salary of $180,000 to $240,000 annually.
- Hybrid role based in San Francisco, California; candidates must be local or willing to relocate.
- Visa sponsorship is not available.