Element Biosciences

Senior Engineer I, AI/Data Science

Element Biosciences
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6 days ago
San Diego, CA, USASenior
H1B sponsor

Base Salary

$127k - $155k/yr

Responsibilities

  • Develop and implement deep learning models for biological image analysis and classification.
  • Support deployment and maintenance of neural network models on AWS or directly on imaging instruments.
  • Apply image processing and computer vision techniques to multimodal biological images, including segmentation, feature extraction, and quality scoring.
  • Contribute to end-to-end ML pipelines spanning data ingestion, preprocessing, training, validation, and inference.
  • Analyze single-cell and multiomic data to support biological interpretation of imaging results.
  • Collaborate with biology, software engineering, instrumentation, molecular biology, chemistry, and data-engineering teams on experiments and model objectives.
  • Explore imaging datasets to identify patterns, failure modes, and model improvement opportunities.
  • Communicate findings and model performance metrics through reports and presentations.
  • Evaluate advances in deep learning, computer vision, and computational biology for internal research problems.

Requirements

  • PhD with 0–3 years of experience is strongly preferred, or a minimum of a master's degree in Computer Science, Electrical Engineering, Bioinformatics, Computational Biology, or a related field with 2–4 years of relevant experience.
  • Experience developing deep learning models for image analysis is required.
  • Proficiency with CNNs, Vision Transformers, U-Net, or attention-based models is required.
  • Proficiency in Python, PyTorch, torchvision, OpenCV, Scikit-learn, NumPy, and Pandas is required.
  • Knowledge of experimental design, statistical analysis, and quantitative reasoning about model outputs is required.
  • Experience with biological or biomedical image modalities, cloud-hosted or on-instrument deployment, AWS, multiomic and single-cell data, and bioinformatics or computational biology tools is a plus.
  • Strong problem-solving skills, attention to detail, and ability to work across scientific and engineering disciplines are required.
  • The role requires frequently moving boxes weighing up to 20 pounds.

Benefits

  • Base compensation is $127,000–$155,000.
  • Eligible for stock options and a discretionary annual bonus.
  • No-cost health insurance plans are provided.
  • 401(k) with company match is provided.
  • Flexible paid time off is provided.
  • This is a full-time, exempt, onsite role in San Diego with up to 10% domestic travel.

Tech Stack

AWSNumPyOpenCVPandasPythonPyTorchscikit-learn

Categories

Element Biosciences

About Element Biosciences

201-500 employees

Element Biosciences develops and sells benchtop next-generation DNA sequencing systems, consumables, and analysis software for research labs, biotech, and translational genomics groups. Its product line includes the AVITI sequencer with associated flow cells, kits, and service contracts, generating recurring revenue from reagents. Founded in 2017 and headquartered in San Diego, the company is privately held and focuses on short-read sequencing and emerging multiomics applications.

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