Eli Lilly and Company

Technical Lead - Software Developer, Data Foundry

Eli Lilly and Company
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1 month ago

Base Salary

$152k - $244k/yr

Responsibilities

  • Design and maintain FAIR-compliant data pipelines for chemical, biological, high-throughput experimentation, and automation-generated datasets.
  • Develop APIs and services connecting LIMS, ELNs, instruments, data warehouses, and analytical databases.
  • Build MLOps capabilities including experiment tracking, model versioning, containerized serving, monitoring, drift detection, and retraining.
  • Develop agent-ready APIs, MCP servers or similar infrastructure, and software for closed-loop experimentation.
  • Integrate laboratory automation equipment, scheduling systems, and instrument data streams with Data Foundry infrastructure.
  • Create configurable automation workflow components, scientist-facing applications, dashboards, and workflow tools.
  • Prototype solutions with bench scientists, validate them through feedback, and transition mature systems to Tech@Lilly.
  • Build and operate cloud-native, containerized workflows using infrastructure-as-code, CI/CD, workflow orchestration, security scanning, code review, and automated testing.

Requirements

  • Bachelor's, master's, or PhD in computer science, bioinformatics, computational biology, cheminformatics, chemistry, biology, biomedical engineering, or a related STEM field.
  • Scientific software development experience with a minimum of 10+ years for a bachelor's, 5+ years for a master's, or 1+ year for a PhD.
  • Proficiency in Python and at least one of Java, C#, Go, TypeScript, or Rust, plus strong SQL skills.
  • Experience building RESTful APIs, data pipelines, or services for scientific or technical applications.
  • Preferred experience includes pharmaceutical or biotech discovery workflows, MLOps, cloud platforms, containers, Git, AI agent infrastructure, lab automation, cheminformatics or bioinformatics, data warehousing, scientific standards and ontologies, LIMS/ELNs, instrument integration, workflow orchestration, CI/CD, and Linux/bash scripting.
  • Strong communication, scientist collaboration, learning agility, and willingness to adopt new technologies are preferred.

Benefits

  • Full-time employees are eligible for a company bonus depending in part on company and individual performance.
  • Benefits may include 401(k), pension, vacation, medical, dental, vision, prescription drug, flexible spending, life insurance, leave, employee assistance, fitness, and employee club benefits.
  • The position is located in San Francisco, California.

Tech Stack

Amazon RedshiftApache AirflowAWSAzureBashC#DockerGitGoGoogle BigQueryGoogle Cloud PlatformJavaKubernetesLinuxMLflowPostgreSQLPythonRustSnowflakeSQLTypeScript
Eli Lilly and Company

About Eli Lilly and Company

10,000+ employees
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