Bioinformatics Engineer (Hybrid)

2 months ago

Baltimore, MD, USASenior

Base Salary

$95k - $125k/yr

Responsibilities

Develop and maintain cloud-based infrastructure for scalable genomic data analysis.
Implement and optimize Python and Nextflow bioinformatics workflows, with support for Cromwell or CWL.
Integrate bioinformatics pipelines with Laboratory Information Management Systems.
Ensure compliance with IT security, privacy, regulatory, and quality controls.
Develop and manage databases and applications for quality control and assay performance monitoring.
Document and validate bioinformatics systems for clinical diagnostics.
Collaborate with laboratory, LIMS, IT, and other cross-functional teams supporting clinical production, clinical trials, and assay R&D.

Bachelor’s degree required; master’s degree preferred.
Background in software or infrastructure engineering with experience in bioinformatics.
Experience managing bioinformatics pipeline workflows, particularly Nextflow, Cromwell, or CWL.
Hands-on experience developing cloud-native infrastructure, preferably on AWS, for storage, batch computing, and serverless applications.
Expertise with infrastructure-as-code technologies such as Terraform or AWS CDK.
Strong programming skills in Python, JavaScript/TypeScript, R, or other relevant scripting languages.
Experience developing and integrating JSON-based REST APIs.
Understanding of version control, CI/CD practices, and software development lifecycle practices.
Ability to work cross-functionally with minimal supervision and troubleshoot technical issues effectively.
Strong written and verbal English communication skills, including the ability to explain technical concepts to nontechnical stakeholders.
Preferred experience in clinical diagnostics or regulated environments and knowledge of software validation and regulatory requirements.
Familiarity with controlled processes, environment management, quality control systems, and DevOps methodologies in clinical settings.

Day 1 medical, supplemental health, dental, and vision coverage for eligible full-time employees working 30 or more hours.
Well-being programs, a no-cost annual health assessment, and mental health support.
Vacation and Health/Flex Time, six holidays, and one additional MyDay off.
401(k) pre-tax and/or Roth IRA with company match up to 5% after 12 months of service.
Employee stock purchase plan, life and disability insurance, and flexible spending accounts.
Annual incentive plans, matching gifts, education assistance, and career advancement opportunities.
Hybrid work arrangement is indicated in the job title.

10,000+ employees